I have been putting off having to manually input all my direct checkout sales because I didn't want to have duplicates once they synced everything, plus it is a total pain in the a. But since quarter 2 taxes are due in less than 2 weeks I contacted Outright about it.
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Here is their response......
Hi Cynthia,
Etsy has only recently released Direct Checkout, and only to a small number of users. Both Outright and Etsy are currently working to get us up and running on this new system, but it's still a bit far in the future to be sure of when we'll be able to support it.
Until we can update Outright to support Direct Checkout, you have two options: enter the sales manually, or link your business' bank account and count the sales when Etsy deposits your Direct Checkout funds into your bank.
Entering manually can be time-consuming, but it does mean that you have your transactions listed on the day they occurred, and for the right amounts. If you link your bank account, Outright will automatically import all the transactions for that account including your direct check out transactions once Etsy deposits your Direct Checkout funds. You will want to recategorize the transaction to sales once it is imported.
The Etsy Direct Check Out integration will most likely be forward facing meaning that only transactions actions occurring after it is linked will show up.
Keep an eye on the following post in the Feature Requests forum for updates, but we'll be sure to create a new post when Direct Checkout goes live on Outright.
http://help.outright.com/entries/21303041-integrate-etsy-com-direct-checkoutJon
Outright Customer Care
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It looks likely that once DC is synced, it will only integrate sales/info from that point on, not past sales. Most of my incoming sales are done through DC now since etsy has it as the default payment method. I'm glad buyers have that choice now, but hate not having everything sync smoothly like it did before. My records are all out of whack!